DHF109 Medical Organic ChemistryIstanbul Okan UniversityDegree Programs DentistryGeneral Information For StudentsDiploma SupplementErasmus Policy StatementNational Qualifications
Dentistry
Bachelor TR-NQF-HE: Level 6 QF-EHEA: First Cycle EQF-LLL: Level 6

General course introduction information

Course Code: DHF109
Course Name: Medical Organic Chemistry
Course Semester: Fall
Course Credits:
Theoretical Practical Credit ECTS
2 0 2 2
Language of instruction: TR
Course Requisites:
Does the Course Require Work Experience?: Yes
Type of course: Compulsory
Course Level:
Bachelor TR-NQF-HE:6. Master`s Degree QF-EHEA:First Cycle EQF-LLL:6. Master`s Degree
Mode of Delivery: Face to face
Course Coordinator : Dr.Öğr.Üyesi HADI KARIMKHAN
Course Lecturer(s): Prof. Dr. GÜLDEN BURÇAK
Dr.Öğr.Üyesi HADI KARIMKHAN
Course Assistants:

Course Objective and Content

Course Objectives: Evaluate the chemical reactions occurring in living organisms and in laboratory and the properties of organic reactions.
Course Content: This course contains;
1. Introduction to organic chemistry, C-C bonding
2. C-heteroatom bonding and properties
3. Alkanes and radicalic reactions
4. Alkenes
5. Elimination and addition reactions
6. Alkines and cycloalkanes
7. Aromatic structure and aromatic substitution reactions
8. Stereochemistry
9. Alkyl halogenures and nucleophylic substiyution reactions
10. Acid-base properties, alkohols and phenols
11. Carbonyl compounds, aldehydes and ketones
12. Nucleophylic addition to carbonyl groups
13. α-Addition to carbonyl groups
14. Carboxylic acids and their derivatives, amines and their reactions
15. Amino acids and proteins, carbohydrates, nucleic acids : DNA and RNA .

Learning Outcomes

The students who have succeeded in this course;
Learning Outcomes
1 - Knowledge
Theoretical - Conceptual
2 - Skills
Cognitive - Practical
3 - Competences
Communication and Social Competence
Learning Competence
1) 1. will be able to categorize organic compounds.
2) 1.1. distinguishes alkanes, alkenes and alkynes.
3) 1.2. illustrates alkylhalogenures, alcohols, phenols, ethers and amines.
4) 1.3. recognizes carboxylic acids, esters, acide halogenures, acide anhydrides and amides.
5) 1.4. illustrates aldehydes, ketones and their derivatives.
6) 2. will be able to interpret the reactions of compounds in different organic categories.
7) 2.1. demonstrates elimination reactions.
8) 2.2. demonstrates substitution reactions.
9) 2.3. explains mechanisms of organic reactions.
10) 3. will be able to define isomerism.
11) 3.1.defines structural isomerism.
12) 3.2.defines fonctional group isomerism
13) 3.3. defines geometric isomerism.
14) 4. will be classified natural and synthetic polymers.
15) 4.1. illustrated the polymers derived from sugars.
16) 4.2. classified the polimers derived from aminoacids or nucleic acids.
17) 4.3. distinguishes synthetic polymers.
Field Specific Competence
Competence to Work Independently and Take Responsibility

Lesson Plan

Week Subject Related Preparation
1) Introduction Organic Chemistry in Medicine 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
2) Aromatic Compounds 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
3) Alkanes, Alkenes, Alkynes, cycloalkanes, Aromatic reactions 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
4) Stereoisomerism 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
5) Functional Groups 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
6) Reactions 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
7) Amino Acids 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
8) Midterm 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
9) Proteins 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
10) DNA Yapisi ve Repli̇kasyon 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
11) Structure and function of DNA 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
12) Carbohydrates 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
13) Lipids 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
14) Enzymes I 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
15) Enzymes II 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry
16) Final Exam 1. Organic Chemistry 2. Harper's Illustrated Biochemistry 3. Lehninger Principles of Biochemistry

Sources

Course Notes / Textbooks: 1. Organik Kimya
Yazarlar: Graham Solomons
Yayınevi: Literatür Yayıncılık - 11.Baskı (2016)
ISBN: 9789750407390

2. Organic Chemistry
Yazarlar: T. W. Graham Solomons , Craig B. Fryhle , Scott A. Snyder
Yayınevi: Wiley - 2017
ISBN: 9781119248972

3. Harper Biyokimya
Yazarlar: Murray, Bender, Weil, Botham, Kennely, Rodwell
Yayınevi: Nobel Tıp Kitabevi - 2015
ISBN: 9786053351542

4. Harper's Illustrated Biochemistry
Yazarlar: Robert K. Murray, David A Bender, Kathleen M. Botham, Peter J. Kennelly, Victor W. Rodwell and P. Anthony Weil
Yayınevi: McGraw –Hill; 29th Edition (2015)
ISBN: 978 - 0- 07-176576-3

5. Lehninger Principles of Biochemistry
Yazarlar: David L. Nelson and Michael M. Cox
Yayınevi: W. H. Freeman; 6th Edition (2012)
ISBN: 10: 071677108X

6. Lehninger - Biyokimyanın İlkeleri
Yazarlar:Y. Murat Elçin, David Nelson , Michael M. Cox
Yayınevi: Palme Yayınevi - Akademik Kitaplar - 2018
ISBN: 9786053551393
References: 1. Organik Kimya
Yazarlar: Graham Solomons
Yayınevi: Literatür Yayıncılık - 11.Baskı (2016)
ISBN: 9789750407390

2. Organic Chemistry
Yazarlar: T. W. Graham Solomons , Craig B. Fryhle , Scott A. Snyder
Yayınevi: Wiley - 2017
ISBN: 9781119248972

3. Harper Biyokimya
Yazarlar: Murray, Bender, Weil, Botham, Kennely, Rodwell
Yayınevi: Nobel Tıp Kitabevi - 2015
ISBN: 9786053351542

4. Harper's Illustrated Biochemistry
Yazarlar: Robert K. Murray, David A Bender, Kathleen M. Botham, Peter J. Kennelly, Victor W. Rodwell and P. Anthony Weil
Yayınevi: McGraw –Hill; 29th Edition (2015)
ISBN: 978 - 0- 07-176576-3

5. Lehninger Principles of Biochemistry
Yazarlar: David L. Nelson and Michael M. Cox
Yayınevi: W. H. Freeman; 6th Edition (2012)
ISBN: 10: 071677108X

6. Lehninger - Biyokimyanın İlkeleri
Yazarlar:Y. Murat Elçin, David Nelson , Michael M. Cox
Yayınevi: Palme Yayınevi - Akademik Kitaplar - 2018
ISBN: 9786053551393

Course-Program Learning Outcome Relationship

Learning Outcomes

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

Program Outcomes
1) ---
2) ...
3) ....
4) ...
5) ....
6) ...

Course - Learning Outcome Relationship

No Effect 1 Lowest 2 Low 3 Average 4 High 5 Highest
           
Program Outcomes Level of Contribution
1) --- 5
2) ... 4
3) .... 4
4) ... 4
5) .... 5
6) ... 4

Learning Activity and Teaching Methods

Expression
Brainstorming/ Six tihnking hats
Individual study and homework
Lesson
Group study and homework
Lab
Homework
Q&A / Discussion
Application (Modelling, Design, Model, Simulation, Experiment etc.)

Assessment & Grading Methods and Criteria

Written Exam (Open-ended questions, multiple choice, true-false, matching, fill in the blanks, sequencing)
Oral Examination
Homework
Application

Assessment & Grading

Semester Requirements Number of Activities Level of Contribution
Homework Assignments 10 % 10
Midterms 38 % 40
Final 50 % 50
total % 100
PERCENTAGE OF SEMESTER WORK % 50
PERCENTAGE OF FINAL WORK % 50
total % 100

Workload and ECTS Credit Grading

Activities Number of Activities Duration (Hours) Workload
Course Hours 32 2 64
Study Hours Out of Class 8 1 8
Midterms 1 1 1
Final 1 1 1
Total Workload 74